<![CDATA[Multiwfn forum / BSSE corrected binding Gibbs free energies]]> - //www.umsyar.com/wfnbbs/viewtopic.php?id=642 Thu, 25 Aug 2022 15:32:52 +0000 FluxBB <![CDATA[Re: BSSE corrected binding Gibbs free energies]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=2669#p2669 Thanks a lot.

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Thu, 25 Aug 2022 15:32:52 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=2669#p2669
<![CDATA[Re: BSSE corrected binding Gibbs free energies]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=2667#p2667 Dear Dehbandi,

eps(mixed) = eps(water)*0.1 + eps(DMSO)*0.9
where eps(water) and eps(DMSO) can be directly found from Gaussian manual.

Best,

Tian

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Thu, 25 Aug 2022 15:05:38 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=2667#p2667
<![CDATA[Re: BSSE corrected binding Gibbs free energies]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=2666#p2666 Dear prof.Tian Lu

I would like to calculate (eps=??) for mixed solvents such as binary solvent (DMSO: Water=9:1 v/v).

Best regards
Behnam Dehbandi

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Thu, 25 Aug 2022 13:38:43 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=2666#p2666
<![CDATA[Re: BSSE corrected binding Gibbs free energies]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=2652#p2652 Dear Behnam Dehbandi,

Static dielectric constant is not calculated by Gaussian, but should be specified by user in Gaussian input file. As you know volume ratio of different solvents and static dielectric constant of each kind of pure solvent, you can directly estimate static dielectric constant of mixed solvent.

Best,

Tian

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Fri, 19 Aug 2022 23:20:17 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=2652#p2652
<![CDATA[Re: BSSE corrected binding Gibbs free energies]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=2651#p2651 Dear prof.Tian Lu
How can I calculate the static dielectric constant of mixed solvent in gaussian?
Best regards
Behnam Dehbandi

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Fri, 19 Aug 2022 17:23:59 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=2651#p2651
<![CDATA[Re: BSSE corrected binding Gibbs free energies]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=2648#p2648 behnam12 wrote:

Dear prof.Tian Lu

How can I calculate the mixture of solvent in gaussian? How will I specify the mixture of solvents in gaussian inputs? also, How can I  calculate free Gibbs  G salvation with different mole fractions?

Best regards
Behnam Dehbandi

Dear Behnam Dehbandi,

You can specify mixed solvent by customizing static dielectric constant, for example

#p B3LYP/6-31G* scrf=read

test

0 1
 C                  0.00000000    0.00000000   -0.52887900
 H                  0.00000000    0.93777000   -1.12367000
 O                  0.00000000    0.00000000    0.67757700
 H                  0.00000000   -0.93777000   -1.12367000

eps=18.5

Where 18.5 is static dielectric constant of mixed solvent, which can be estimated as dielectric constant of each kind of solvent weighted by their volumes.

I don't well understand your second question.

Best,

Tian

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Thu, 18 Aug 2022 22:55:27 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=2648#p2648
<![CDATA[Re: BSSE corrected binding Gibbs free energies]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=2647#p2647 Dear prof.Tian Lu

How can I calculate the mixture of solvent in gaussian? How will I specify the mixture of solvents in gaussian inputs? also, How can I  calculate free Gibbs  G salvation with different mole fractions?

Best regards
Behnam Dehbandi

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Thu, 18 Aug 2022 15:02:56 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=2647#p2647
<![CDATA[Re: BSSE corrected binding Gibbs free energies]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=2646#p2646 Thanks a lot.

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Thu, 18 Aug 2022 09:01:59 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=2646#p2646
<![CDATA[Re: BSSE corrected binding Gibbs free energies]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=2644#p2644 Anjali Ganai wrote:

Can I use out =wfn with job type energy and pop=(full,nbo) in gaussian to generate the .wfn file for NCI analysis?

You can.

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Wed, 17 Aug 2022 11:52:55 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=2644#p2644
<![CDATA[Re: BSSE corrected binding Gibbs free energies]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=2641#p2641 Can I use out =wfn with job type energy and pop=(full,nbo) in gaussian to generate the .wfn file for NCI analysis?

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Wed, 17 Aug 2022 10:18:00 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=2641#p2641
<![CDATA[Re: BSSE corrected binding Gibbs free energies]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=2640#p2640 Thank you very much sir.

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Wed, 17 Aug 2022 10:14:22 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=2640#p2640
<![CDATA[Re: BSSE corrected binding Gibbs free energies]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=2639#p2639 Anjali Ganai wrote:

My another question is
While running the job with type 'energy' and counterpoise=2, can I add out=wfn to get the .wfn file which will be used for Non-covalent interaction (NCI) analysis  in Multiwfn? Or do I have to run two separate jobs- one for counterpoise=2 and another for wfn file which will be used for Non-covalent interaction (NCI) analysis ?

Please do not try to produce wavefunction file using counterpoise task. Counterpoise task should only be used to evaluate BSSE correction energy and corrected interaction energy.

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Wed, 17 Aug 2022 10:10:48 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=2639#p2639
<![CDATA[Re: BSSE corrected binding Gibbs free energies]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=2638#p2638 Anjali Ganai wrote:

I had a question regarding BSSE corrected binding energy.
I want to calculate BSSE corrected binding energy of say A+B----> AB
I have the energies of molecules A, B and complex AB.
So, del E' = E(AB) - E(A)- E(B).
I then run a job in gaussian with type 'energy' and counterpoise=2. The .log file contains  'BSSE energy =       0.015554255487'
Will the BSSE corrected binding energy be delE'+  0.015554255487 ?

It is correct.

By the way, if your Gaussian version is not too old, counterpoise task will directly give you "complexation energy", it is just the interaction energy corrected by BSSE.

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Wed, 17 Aug 2022 10:09:38 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=2638#p2638
<![CDATA[Re: BSSE corrected binding Gibbs free energies]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=2637#p2637 My another question is
While running the job with type 'energy' and counterpoise=2, can I add out=wfn to get the .wfn file which will be used for Non-covalent interaction (NCI) analysis  in Multiwfn? Or do I have to run two separate jobs- one for counterpoise=2 and another for wfn file which will be used for Non-covalent interaction (NCI) analysis ?

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Wed, 17 Aug 2022 09:27:13 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=2637#p2637
<![CDATA[Re: BSSE corrected binding Gibbs free energies]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=2636#p2636 I had a question regarding BSSE corrected binding energy.
I want to calculate BSSE corrected binding energy of say A+B----> AB
I have the energies of molecules A, B and complex AB.
So, del E' = E(AB) - E(A)- E(B).
I then run a job in gaussian with type 'energy' and counterpoise=2. The .log file contains  'BSSE energy =       0.015554255487'
Will the BSSE corrected binding energy be delE'+  0.015554255487 ?

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Wed, 17 Aug 2022 09:22:45 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=2636#p2636