<![CDATA[Multiwfn forum / executing multiple wfn files for ELF analysis automatically]]> - //www.umsyar.com/wfnbbs/viewtopic.php?id=229 Wed, 26 Jan 2022 17:42:30 +0000 FluxBB <![CDATA[Re: executing multiple wfn files for ELF analysis automatically]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=2207#p2207 Add recalc=4 to IRC and retry. If it doesn't work, also add stepsize=5 and further retry.

PS: More comprehensive description of this problem and various key points about performing IRC task can be found in //www.umsyar.com/400, which was written in Chinese.

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Wed, 26 Jan 2022 17:42:30 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=2207#p2207
<![CDATA[Re: executing multiple wfn files for ELF analysis automatically]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=2206#p2206 I added the keyword LQA in the route section. Unfortunately just calculate 3 point but  the route section contain # irc=(calcfc,maxpoints=15) m062x/6-311++g(d,P).

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Wed, 26 Jan 2022 16:38:43 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=2206#p2206
<![CDATA[Re: executing multiple wfn files for ELF analysis automatically]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=2205#p2205 behnam12 wrote:

Hi Dear Professor Tian Lu
I try to do IRC calculations in Gaussian16. The calculations end with error termination and at the end of the .log file, there is a message:

CORRECTOR INTEGRATION CONVERGENCE:
   Recorrection delta-x convergence threshold:    0.010000
   Delta-x Convergence NOT Met
A maximum number of corrector steps exceded.

Add "LQA" into IRC keyword to change the default HPC algorithm to LQA algorithm.

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Wed, 26 Jan 2022 16:10:14 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=2205#p2205
<![CDATA[Re: executing multiple wfn files for ELF analysis automatically]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=2204#p2204 Hi Dear Professor Tian Lu
I try to do IRC calculations in Gaussian16. The calculations end with error termination and at the end of the .log file, there is a message:

CORRECTOR INTEGRATION CONVERGENCE:
   Recorrection delta-x convergence threshold:    0.010000
   Delta-x Convergence NOT Met
A maximum number of corrector steps exceded.

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Wed, 26 Jan 2022 15:36:46 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=2204#p2204
<![CDATA[Re: executing multiple wfn files for ELF analysis automatically]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=713#p713 Dear Professor Tian Lu,

Thank you very very much for your help and assistance.


Sincerely,
Anas Ouled aitouna

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Tue, 29 Oct 2019 12:28:30 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=713#p713
<![CDATA[Re: executing multiple wfn files for ELF analysis automatically]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=712#p712 Please check Section 5.3 of manual, as you can see, a Windows batch script that loops over all .wfn files in current folder is already given:

for /f %%i in ('dir *.wfn /b') do (
Multiwfn %%i < genELFcub.txt > null
rename ELF.cub %%~ni_ELF.cub
)

In this script, each .wfn file is taken as input file of Multiwfn in turn, Multiwfn executes the commands recorded in the genELFcub.txt file, then the resulting ELF.cub is generated in current folder, and this script automatically rename it with prefix.

If you are still confused, you can Google basic knowledge about shell script programming.

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Tue, 29 Oct 2019 02:56:53 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=712#p712
<![CDATA[Re: executing multiple wfn files for ELF analysis automatically]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=711#p711 Dear Professor Tian Lu,

I work on windows 8.1 system

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Mon, 28 Oct 2019 22:05:20 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=711#p711
<![CDATA[Re: executing multiple wfn files for ELF analysis automatically]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=710#p710 Please let me know the operation system you are currently using.

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Mon, 28 Oct 2019 20:41:27 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=710#p710
<![CDATA[Re: executing multiple wfn files for ELF analysis automatically]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=709#p709 Dear Professor Tian Lu,

First, i want to thank you for the assistance you provide in this field for the beginners chemist like me in this. Your precious tutorials are very very helpful.

the big problem i face is how to write the script to loop all the wfn files, my programing skills are not too good, I hope you can guide me.


Sincerely,
Anas Ouled aitouna

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Mon, 28 Oct 2019 10:25:40 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=709#p709
<![CDATA[Re: executing multiple wfn files for ELF analysis automatically]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=708#p708 Dear Anas Ouled aitouna,

It is quite easy, please check Section 5.2 and 5.3 of Multiwfn manual. You need to write a shell script to loop all .wfn files; for each file, run Multiwfn according to the commands recorded in a plain text file. Section 4.A.1 of Multiwfn manual presented a practical instance of using Multiwfn to deal with multiple wavefunction files.

Best,

Tian

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Sun, 27 Oct 2019 17:10:43 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=708#p708
<![CDATA[executing multiple wfn files for ELF analysis automatically]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=707#p707 Hello Everybody, that's my first topic in the forum.

I'm working on a reaction theoretically using Gaussian 09 software, and i need to do the ELF analysis for each point of the IRC path, i used the IRCsplit program to generate all the necessary WFN files (Thank you very much Pr. Tian Lu for the wonderful tools).

Is there a script to execute the ELF analysis for all the WFN files automatically ?

Sincerely,
Anas Ouled aitouna

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Sun, 27 Oct 2019 13:10:23 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=707#p707